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Abstract

This report describes the isolation and characterization of bacterial isolates that produce anti−microbial compounds from one of the South Shetland Islands, King George Is − land, Antarctica. Of a total 2465 bacterial isolates recovered from the soil samples, six (BG5, MTC3, WEK1, WEA1, MA2 and CG21) demonstrated inhibitory effects on the growth of one or more Gram−negative or Gram−positive indicator foodborne pathogens ( i.e. Escherichia coli 0157:H7, Salmonella spp., Klebsiella pneumoniae , Enterobacter cloacae , Vibrio parahaemolyticus and Bacillus cereus ). Upon examination of their 16S rRNA sequences and biochemical profiles, the six Antarctic bacterial isolates were identified as Gram−negative Pedobacter cryoconitis (BG5), Pseudomonas migulae (WEK1), P. corrugata (WEA1) and Pseudomonas spp. (MTC3, MA2, and CG21). While inhibitors produced by strains BG5, MTC3 and CG21 were sensitive to protease treatment, those produced by strains WEK1, WEA1, and MA2 were insensitive to catalase, lipase, a −amylase, and protease enzymes. In addtion, the six Antarctic bacterial isolates appeared to be resistant to multiple antibiotics.
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Authors and Affiliations

Clemente Michael Vui Ling Wong
Heng Keat Tam
Siti Aisyah Alias
Marcelo González
Gerardo González-Rocha
Mariana Domínguez-Yévenes
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Abstract

Microbes living in the polar regions have some common and unique strategies to respond to thermal stress. Nevertheless, the amount of information available, especially at the molecular level is lacking for some organisms such as Antarctic psychrophilic yeast. For instance, it is not known whether molecular chaperones in Antarctic yeasts play similar roles to those from mesophilic yeasts when they are exposed to heat stress. Therefore, this project aimed to determine the gene expression patterns and roles of molecular chaperones in Antarctic psychrophilic Glaciozyma antarctica PI12 that was exposed to heat stress. G. antarctica PI12 was grown at its optimal growth temperature of 12ºC and later exposed to heat stresses at 16ºC and 20ºC for 6 hours. Transcriptomes of those cells were extracted, sequenced and analyzed. Thirty-three molecular chaperone genes demonstrated differential expression of which 23 were up-regulated while 10 were down-regulated. Functions of up-regulated molecular chaperone genes were related to protein binding, response to a stimulus, chaperone binding, cellular response to stress, oxidation, and reduction, ATP binding, DNA-damage response and regulation for cellular protein metabolic process. On the other hand, functions of down-regulated molecular chaperone genes were related to chaperone-mediated protein complex assembly, transcription, cellular macromolecule metabolic process, regulation of cell growth and ribosome biogenesis. The findings provided information on how molecular chaperones work together in a complex network to protect the cells under heat stress. It also highlights the evolutionary conserved protective role of molecular chaperones in psychrophilic yeast, G. antarctica, and mesophilic yeast, Saccharomyces cerevisiae.

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Authors and Affiliations

Nur Athirah Yusof
Clemente Michael Vui Ling Wong
ORCID: ORCID
Abdul Munir Abdul Murad
Farah Diba Abu Bakar
Nor Muhammad Mahadi
Ahmad Yamin Abdul Rahman
Nursyafiqi Zainuddin
Mohd Nazalan Mohd Najimudin
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Abstract

The human movement to and from Antarctica has increased significantly in recent decades, particularly to the South Shetland Islands, King George Island (KGI), and Deception Island (DCI). Such movements may result in unintentional soil transfer to other warmer regions, such as tropical countries. However, the ability of Antarctic bacteria to survive in tropical climates remained unknown. Hence, the objectives of this work were (i) to determine the bacterial diversity of the soils at the study sites on the two islands, and (ii) to determine if simulated tropical-like growth climate conditions would impact overall diversity and increase the abundance of potentially harmful bacteria in the Antarctic soils. KGI and DCI soils were incubated for 12 months under simulated tropical conditions. After 6 and 12-months, samples were collected and subjected to metagenomic DNA extraction, 16S rDNA amplification, sequencing, and alignment analysis. The 12-month denaturing gradient gel electrophoresis (DGGE) analysis revealed changes in fingerprinting patterns and bacterial diversity indices. Following that, bacterial diversity analyses for KGI and DCI soils were undertaken using V3-V4 16S rDNA amplicon sequencing. Major bacterial phyla in KGI and DCI soils comprised Actinobacteria, Proteobacteria, and Verrucomicrobia. Except for Proteobacteria in KGI soils and Acidobacteria and Chloroflexi in DCI soils, most phyla in both soils did not acclimate to simulated tropical conditions. Changes in diversity were also observed at the genus level, with Methylobacterium spp. predominating in both soils after incubation. After the 12-month incubation, the abundance of potentially pathogenic bacteria such as Mycobacterium, Massilia, and Williamsia spp. increased. Overall, there was a loss of bacterial diversity in both Antarctic soils after 12 months, indicating that most bacteria from both islands' sampling sites cannot survive well if the soils were accidentally transported into warmer climates.
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Authors and Affiliations

Chuen Yang Chua
1
Clemente Michael Vui Ling Wong
1 2
ORCID: ORCID
Marcelo González-Aravena
3
ORCID: ORCID
Paris Lavin
4
ORCID: ORCID
Yoke Kqueen Cheah
5
ORCID: ORCID

  1. Biotechnology Research Institute, Universiti Malaysia Sabah, Jalan UMS, 88400 Kota Kinabalu, Sabah, Malaysia
  2. National Antarctic Research Centre, University of Malaya, 50603 Kuala Lumpur, Malaysia
  3. Instituto Antártico Chileno, Plaza Muñoz Gamero 1055, Punta Arenas, Chile
  4. Departamento de Biotecnologia, Facultad de Ciencias del Mar y Recursos Biologicos, Universidad de Antofagasta, Antofagasta 1270300, Chile
  5. Department of Biomedical Science, Faculty of Medicine and Health Sciences, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor Darul Ehsan, Malaysia

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